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Natural Product (NP) Details

General Information of the NP (ID: NP2691)
Name
Spectinomycin
Synonyms
Spectinomycin; actinospectacin; Trobicin; Espectinomicina; Togamycin; 1695-77-8; Antibiotic 2233wp; Spectam; Spectinomycine; Spectinomycinum; Spectinomicina [Italian]; Actinospectacina [Italian]; Spectinomycine [INN-French]; Spectinomycinum [INN-Latin]; Espectinomicina [INN-Spanish]; Spectinomycin hydrochloride; UNII-93AKI1U6QF; M-141; 93AKI1U6QF; CHEBI:9215; SCM; 4H-Pyrano[2,3-b][1,4]benzodioxin-4-one, decahydro-4a,7,9-trihydroxy-2-methyl-6,8-bis(methylamino)-, (2R,4aR,5aR,6S,7S,8R,9S,9aR,10aS)-; Actinospectacina; (2R,4aR,5aR,6S,7S,8R,9S,9aR,10aS)-4a,7,9-trihydroxy-2-methyl-6,8-bis(methylamino)decahydro-4H-pyrano[2,3-b][1,4]benzodioxin-4-one; M 141; U 18409; 22189-32-8; Spectinomycin [INN:BAN]; (1R,3S,5R,8R,10R,11S,12S,13R,14S)-8,12,14-trihydroxy-5-methyl-11,13-bis(methylamino)-2,4,9-trioxatricyclo[8.4.0.03,8]tetradecan-7-one; U 18409 E; XK 43-1; C14H24N2O7; 21736-83-4; U-18409E; EINECS 216-911-3; Spectinomycin HCl/ Sulphate; BRN 2171701; Specitinomycin; SR-05000001868; (2R,4aR,5aR,6S,7S,8R,9S,9aR,10aS)-4a,7,9-trihydroxy-2-methyl-6,8-bis(methylamino)-3,5a,6,7,8,9,9a,10a-octahydro-2H-benzo[[?]]pyrano[[?]][1,4]dioxin-4-one; 4H-Pyrano(2,3-b)(1,4)benzodioxin-4-one, decahydro-4a,7,9-trihydroxy-2-methyl-6,8-bis(methylamino)-; 4H-Pyrano(2,3-b)(1,4)benzodioxin-4-one, decahydro-4a,7,9-trihydroxy-2-methyl-6,8-bis(methylamino)-, (2R,4aR,5aR,6S,7S,8R,9S,9aR,10aS)-; Prospec (TN); Adspec (TN); SPCM; Spectinomycin (INN); NSC132679; Spectrum_000954; Prestwick0_000804; Prestwick1_000804; Prestwick2_000804; Prestwick3_000804; Spectrum2_001315; Spectrum3_000898; Spectrum4_000993; Spectrum5_001407; SCHEMBL3533; CHEMBL1167; BSPBio_000667; KBioGR_001425; KBioSS_001434; DivK1c_000137; SPBio_001409; SPBio_002588; BPBio1_000735; DTXSID9023592; GTPL11127; KBio1_000137; KBio2_001434; KBio2_004002; KBio2_006570; KBio3_001816; NINDS_000137; HMS2089C03; CHX-3101; ZINC53006806; AKOS015961272; CCG-208273; DB00919; IDI1_000137; SMP1_000276; NCGC00017354-02; NCGC00017354-03; NCGC00017354-04; NCGC00142531-01; NCGC00142531-02; AC-13570; NCI60_000023; O212; ST066911; SBI-0051514.P003; C02078; D08526; U18409; AB00642548-10; AB00642548-11; AB00642548_12; AB00642548_13; Q416154; U-18409; ACTINOSPECTACIN; ESPECTINOMICINA; CHX-3101; SR-05000001868-4; ETHYL2-ANILINO-4-CHLORO-5-FORMYL-3-THIOPHENECARBOXYLATE; (1R,3S,5R,8R,10R,11S,12S,13R,14S)-8,12,14-trihydroxy-5-methyl-11,13-bis(methylamino)-2,4,9-trioxatricyclo[8.4.0.0^{3,8}]tetradecan-7-one; (8S,11S,13S,14S,3R,6R,10R,12R)-12,14-bis(methylamino)-3,11,13-trihydroxy-6-met hyl-2,7,9-trioxatricyclo[8.4.0.0<3,8>]tetradecan-4-one
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Species Origin Legionella pneumophila ...     Click to Show/Hide
Legionella pneumophila
SuperKingdom: Bacteria
Phylum: Proteobacteria
Class: Gammaproteobacteria
Order: Legionellales
Family: Legionellaceae
Genus: Legionella
Species: Legionella pneumophila
Disease Bacterial infection [ICD-11: 1A00-1C4Z] Approved [1]
Structure
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2D MOL

3D MOL

    Click to Show/Hide the Molecular Information and External Link(s) of This Natural Product
Formula
C14H24N2O7
PubChem CID
15541
Canonical SMILES
CC1CC(=O)C2(C(O1)OC3C(C(C(C(C3O2)NC)O)NC)O)O
InChI
1S/C14H24N2O7/c1-5-4-6(17)14(20)13(21-5)22-12-10(19)7(15-2)9(18)8(16-3)11(12)23-14/h5,7-13,15-16,18-20H,4H2,1-3H3/t5-,7-,8+,9+,10+,11-,12-,13+,14+/m1/s1
InChIKey
UNFWWIHTNXNPBV-WXKVUWSESA-N
CAS Number
CAS 1695-77-8
ChEBI ID
CHEBI:9215
TTD Drug ID
D02PCR
Combinatorial Therapeutic Effect(s) Validated Clinically or Experimentally
    α. A List of Drug(s) Whose Efficacy can be Enhanced by This NP
          Erythromycin      Bacterial infection     Click to Show/Hide the Molecular Data of This Drug
                 Achieving Therapeutic Synergy     Click to Show/Hide
                    Representative Experiment Reporting the Effect of This Combination [2]
                    Detail(s)  Combination Info  click to show the detail info of this combination
                    In-vitro Model Chlamydia trachomatis strains Microorganism model Chlamydia trachomatis
                    Experimental
                    Result(s)
A combination of spectinomycin with erythromycin was found to be more effective against Chlamydia trachomatis.
          Doxycycline      Periodontal disease     Click to Show/Hide the Molecular Data of This Drug
                 Achieving Therapeutic Synergy     Click to Show/Hide
                    Representative Experiment Reporting the Effect of This Combination [2]
                    Detail(s)  Combination Info  click to show the detail info of this combination
                    In-vitro Model Chlamydia trachomatis strains Microorganism model Chlamydia trachomatis
                    Experimental
                    Result(s)
A combination of spectinomycin with doxycycline was found to be more effective against Chlamydia trachomatis.
Target and Pathway
Target(s) Staphylococcus 30S ribosomal subunit (Stap-coc pbp2)  Molecule Info  [3]
References
Reference 1 FDA Approved Drug Products from FDA Official Website. 2009. Application Number: (NDA) 050347.
Reference 2 In vitro effects of spectinomycin and ceftriaxone alone or in combination with other antibiotics against Chlamydia trachomatis. Antimicrob Agents Chemother. 2005 Apr;49(4):1584-6.
Reference 3 Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics. Nature. 2000 Sep 21;407(6802):340-8.
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Cite NPCDR
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Correspondence

X. N. Sun, Y. T. Zhang, Y. Zhou, X. C. Lian, L. L. Yan, T. Pan, T. Jin, H. Xie, Z. M. Liang, W. Q. Qiu, J. X. Wang, Z. R. Li, F. Zhu*, X. B. Sui*. NPCDR: natural product-based drug combination and its disease-specific molecular regulation. Nucleic Acids Research. 50(D1): 1324-1333 (2020). PMID: 34664659

Prof. Feng ZHU  (zhufeng@zju.edu.cn)

College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China


Prof. Xinbing SUI  (hzzju@hznu.edu.cn)

School of Pharmacy and Department of Medical Oncology, the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University, Hangzhou, China