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Natural Product (NP) Details

General Information of the NP (ID: NP4551)
Name
Heparin
Synonyms
heparin; enoxaparin; 9005-49-6; Ardeparin; Bemiparin; SEMULOPARIN; Lovenox; LMWH; Nadroparin; Nadroparine; Clivarin; Liquaemin; Reviparin; 6-((5-acetamido-4,6-dihydroxy-2-((sulfooxy)methyl)tetrahydro-2H-pyran-3-yl)oxy)-3-((5-((6-carboxy-4,5-dihydroxy-3-(sulfooxy)tetrahydro-2H-pyran-2-yl)oxy)-6-(hydroxymethyl)-3-(sulfoamino)-4-(sulfooxy)tetrahydro-2H-pyran-2-yl)oxy)-4-hydroxy-5-(sulfooxy)tetrahydro-2H-pyran-2-carboxylic acid; Adomiparin; Multiparin; Novoheparin; Parnaparin; Parvoparin; Sandoparin; Sublingula; Tinzaparin; Heparina; Heparine; Heparinum; Hepathrom; Liquemin; Octaparin; Pabyrin; PK-10169; Pularin; Subeparin; Triofiban; Fluxum; Vetren; Hed-heparin; Depo-Heparin; Lipo-hepin; Fragmin A; Fragmin B; Vitrum AB; Eparina [DCIT]; Heparin [BAN]; Adomiparin [USAN]; CY 216; FR 860; Heparin CY 216; Heparine [INN-French]; Heparinum [INN-Latin]; Heparina [INN-Spanish]; Semuloparin [USAN:INN]; UNII-1K5KDI46KZ; UNII-4QW4AN84NQ; UNII-E47C0NF7LV; UNII-VL0L558GCB; 1K5KDI46KZ; 4QW4AN84NQ; E47C0NF7LV; UNII-P776JQ4R2F; UNII-V72OT3K19I; VL0L558GCB; 2-o-sulfohexopyranuronosyl-(1->4)-2-deoxy-3-o-sulfo-2-(sulfoamino)hexopyranosyl-(1->4)-2-o-sulfohexopyranuronosyl-(1->4)-2-acetamido-2-deoxy-6-o-sulfohexopyranose; SCHEMBL543122; UNII-5R0L1D739E; UNII-7UQ7X4Y489; UNII-M316WT19D8; UNII-S79O08V79F; UNII-T2410KM04A; GTPL6811; M 118REH; P776JQ4R2F; V72OT3K19I; Cy 222; HSDB 3094; DTXSID80872762; 5R0L1D739E; 7UQ7X4Y489; M316WT19D8; S79O08V79F; T2410KM04A; UNII-9816XA9004; AVE-5026; BCP13334; EINECS 232-681-7; KB 101; OP 386; OP 622; RP-54563; 9816XA9004; M 118; Q416516; 6-[5-acetamido-4,6-dihydroxy-2-(sulfooxymethyl)oxan-3-yl]oxy-3-[5-(6-carboxy-4,5-dihydroxy-3-sulfooxyoxan-2-yl)oxy-6-(hydroxymethyl)-3-(sulfoamino)-4-sulfooxyoxan-2-yl]oxy-4-hydroxy-5-sulfooxyoxane-2-carboxylic acid; 6-[6-[6-[5-acetamido-4,6-dihydroxy-2-(sulfooxymethyl)tetrahydropyran-3-yl]oxy-2-carboxy-4-hydroxy-5-sulfooxy-tetrahydropyran-3-yl]oxy-2-(hydroxymethyl)-5-(sulfoamino)-4-sulfooxy-tetrahydropyran-3-yl]oxy-3,4-dihydroxy-5-sulfooxy-tetrahydropyran-2-carboxylic acid
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Species Origin Filipendula ulmaria ...     Click to Show/Hide
Filipendula ulmaria
Kingdom: Viridiplantae
Phylum: Streptophyta
Class: Magnoliopsida
Order: Rosales
Family: Rosaceae
Genus: Filipendula
Species: Filipendula ulmaria
Disease Deep vein thrombosis [ICD-11: BD71] Approved [1]
Structure
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2D MOL

3D MOL

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Formula
C26H42N2O37S5
PubChem CID
772
Canonical SMILES
CC(=O)NC1C(C(C(OC1O)COS(=O)(=O)O)OC2C(C(C(C(O2)C(=O)O)OC3C(C(C(C(O3)CO)OC4C(C(C(C(O4)C(=O)O)O)O)OS(=O)(=O)O)OS(=O)(=O)O)NS(=O)(=O)O)O)OS(=O)(=O)O)O
InChI
1S/C26H42N2O37S5/c1-4(30)27-7-9(31)13(6(56-23(7)39)3-55-67(43,44)45)58-26-19(65-70(52,53)54)12(34)16(20(62-26)22(37)38)60-24-8(28-66(40,41)42)15(63-68(46,47)48)14(5(2-29)57-24)59-25-18(64-69(49,50)51)11(33)10(32)17(61-25)21(35)36/h5-20,23-26,28-29,31-34,39H,2-3H2,1H3,(H,27,30)(H,35,36)(H,37,38)(H,40,41,42)(H,43,44,45)(H,46,47,48)(H,49,50,51)(H,52,53,54)
InChIKey
HTTJABKRGRZYRN-UHFFFAOYSA-N
CAS Number
CAS 9005-49-6
Herb ID
HBIN029056
TTD Drug ID
D01ZJK
Combinatorial Therapeutic Effect(s) Validated Clinically or Experimentally
    α. A List of Drug(s) Whose Efficacy can be Enhanced by This NP
          X-ray irradiation      Scaphoid Fracture     Click to Show/Hide the Molecular Data of This Drug
                 Achieving Therapeutic Synergy     Click to Show/Hide
                    Representative Experiment Reporting the Effect of This Combination [2]
                    Detail(s)  Combination Info  click to show the detail info of this combination
                    Molecule(s)
                    Regulation
Down-regulation Expression BIRC5  Molecule Info 
Pathway MAP
Down-regulation Expression CD34  Molecule Info 
Pathway MAP
Down-regulation Expression IL6  Molecule Info 
Pathway MAP
Down-regulation Expression TGFB1  Molecule Info 
Pathway MAP
                    In-vivo Model Lewis lung cancer cells (~3*106) were subcutaneously injected into the right anterior leg of each mouse to establish the tumor-bearing mouse model.
                    Experimental
                    Result(s)
A combinatory treatment strategy of nadroparin with fractionated irradiation had a strong synergistic antitumor effect in vivo, which may be associated with the promotion of apoptosis, inhibited secretion of TGF-Beta1 and IL-6 and down-regulation of CD34 and survivin expression.
          Bivalirudin      Thrombocytopenia     Click to Show/Hide the Molecular Data of This Drug
                 Achieving Therapeutic Synergy     Click to Show/Hide
                    Representative Experiment Reporting the Effect of This Combination [3]
                    Detail(s)  Combination Info  click to show the detail info of this combination
                    Biological
                    Regulation
Decrease clotting time
                    In-vitro Model Human fibroblasts collected from a skin biopsy Healthy Homo sapiens
Human liver non-parenchymal cells obtained after liver isolation Healthy Homo sapiens
hALPCs obtained from healthy liver donors Healthy Homo sapiens
                    Experimental
                    Result(s)
Concomitant administration of an antithrombin activator or direct factor Xa inhibitor and direct thrombin inhibitor proved to be a particularly effective combination for controlling the procoagulant effects of hALPCs both in vitro and in vivo.
Target and Pathway
Target(s) Antithrombin-III (ATIII)  Molecule Info  [4]
KEGG Pathway Complement and coagulation cascades Click to Show/Hide
Panther Pathway Blood coagulation Click to Show/Hide
Pathway Interaction Database Glypican 1 network Click to Show/Hide
Reactome Intrinsic Pathway of Fibrin Clot Formation Click to Show/Hide
2 Common Pathway of Fibrin Clot Formation
WikiPathways Complement and Coagulation Cascades Click to Show/Hide
2 Formation of Fibrin Clot (Clotting Cascade)
References
Reference 1 Pharmacologic profile of certoparin. Expert Opin Investig Drugs. 1999 Mar;8(3):315-27.
Reference 2 Antitumor effects of nadroparin combined with radiotherapy in Lewis lung cancer models. Onco Targets Ther. 2018 Aug 24;11:5133-5142.
Reference 3 Bivalirudin in combination with heparin to control mesenchymal cell procoagulant activity. PLoS One. 2012;7(8):e42819.
Reference 4 Oral heparin: status review. Thromb J. 2006; 4: 6.
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Cite NPCDR
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Correspondence

X. N. Sun, Y. T. Zhang, Y. Zhou, X. C. Lian, L. L. Yan, T. Pan, T. Jin, H. Xie, Z. M. Liang, W. Q. Qiu, J. X. Wang, Z. R. Li, F. Zhu*, X. B. Sui*. NPCDR: natural product-based drug combination and its disease-specific molecular regulation. Nucleic Acids Research. 50(D1): 1324-1333 (2020). PMID: 34664659

Prof. Feng ZHU  (zhufeng@zju.edu.cn)

College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China


Prof. Xinbing SUI  (hzzju@hznu.edu.cn)

School of Pharmacy and Department of Medical Oncology, the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University, Hangzhou, China