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Natural Product (NP) Details

General Information of the NP (ID: NP8937)
Name
Pinocembrin
Synonyms
Pinocembrin; 480-39-7; (+)-Pinocembrin; (2S)-pinocembrin; 4H-1-Benzopyran-4-one, 2,3-dihydro-5,7-dihydroxy-2-phenyl-, (2S)-; (S)-5,7-dihydroxy-2-phenylchroman-4-one; UNII-8T7C8CH791; (2s)-5,7-dihydroxy-2-phenyl-2,3-dihydro-4h-chromen-4-one; (S)-5,7-dihydroxyflavanone; CHEMBL399910; CHEBI:28157; (S)-2,3-Dihydro-5,7-dihydroxy-2-phenyl-4H-1-benzopyran-4-one; 8T7C8CH791; Pinocembrin (6CI); (2S)-5,7-dihydroxy-2-phenyl-3,4-dihydro-2H-1-benzopyran-4-one; SMR000232372; 4H-1-Benzopyran-4-one, 2,3-dihydro-5,7-dihydroxy-2-phenyl-, (-)-; NSC 43318; NSC 279005; NSC 661207; NSC43318; 4H-1-Benzopyran-4-one, 2,3-dihydro-5,7-dihydroxy-2-phenyl-, (S)-; NSC-43318; NSC661207; NSC-279005; Spectrum_001879; SpecPlus_000896; Spectrum2_001670; Spectrum3_001635; Spectrum4_001765; Spectrum5_000349; Oprea1_508274; BSPBio_003329; KBioGR_002249; KBioSS_002406; MLS000697595; MLS000728654; DivK1c_006992; SPBio_001859; DTXSID3075412; SCHEMBL10026578; BDBM26667; KBio1_001936; KBio2_002401; KBio2_004969; KBio2_007537; KBio3_002549; ZINC73693; HMS2205J20; HY-N0575; CCG-39668; LMPK12140214; s3941; STL578139; AKOS004111068; SDCCGMLS-0066749.P001; NCGC00178137-01; AS-56293; ST023293; (2S)-5,7-dihydroxy-2-phenylchroman-4-one; CS-0009111; (2S)-5,7-dihydroxy-2-phenyl-chroman-4-one; C09827; SR-01000762561; SR-01000762561-3; BRD-K94689771-001-02-5; Pinocembrin, analytical standard, 95% (TLC), solid; 4H-1-Benzopyran-4-one, 2,3-dihydro-5,7-dihydroxy-2-phenyl-, (S)-(-)-
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Species Origin Eucalyptus ...     Click to Show/Hide
Eucalyptus
Kingdom: Viridiplantae
Phylum: Streptophyta
Class: Magnoliopsida
Order: Myrtales
Family: Myrtaceae
Genus: Eucalyptus
Disease Ischemic stroke [ICD-11: 8B11] Phase 2 [1]
Structure
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2D MOL

3D MOL

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Formula
C15H12O4
PubChem CID
68071
Canonical SMILES
C1C(OC2=CC(=CC(=C2C1=O)O)O)C3=CC=CC=C3
InChI
1S/C15H12O4/c16-10-6-11(17)15-12(18)8-13(19-14(15)7-10)9-4-2-1-3-5-9/h1-7,13,16-17H,8H2/t13-/m0/s1
InChIKey
URFCJEUYXNAHFI-ZDUSSCGKSA-N
CAS Number
CAS 480-39-7
ChEBI ID
CHEBI:28157
Herb ID
HBIN039998
SymMap ID
SMIT02875
TCMSP ID
MOL000230
TTD Drug ID
D0G5CS
Combinatorial Therapeutic Effect(s) Validated Clinically or Experimentally
    α. A List of Drug(s) Whose Efficacy can be Enhanced by This NP
          Simvastatin      Hyper-lipoproteinaemia     Click to Show/Hide the Molecular Data of This Drug
                 Achieving Therapeutic Synergy     Click to Show/Hide
                    Representative Experiment Reporting the Effect of This Combination [2]
                    Detail(s)  Combination Info  click to show the detail info of this combination
                    Molecule(s)
                    Regulation
Down-regulation Expression VEGFA  Molecule Info 
Pathway MAP
                    In-vivo Model ApoE / mice (8 weeks old) were fed a high fat diet (21% fat and 0.15% cholesterol).
                    Experimental
                    Result(s)
The combination of simvastatin and pinocembrin synergistically inhibited atherosclerotic lesion development in ApoE-/- mice with hyperlipidemia, which is partially dependent on the protective of vascular endothelium.
Target and Pathway
Target(s) Cytochrome P450 1B1 (CYP1B1)  Molecule Info  [3]
BioCyc Superpathway of tryptophan utilization Click to Show/Hide
2 Superpathway of melatonin degradation
3 Melatonin degradation I
KEGG Pathway Steroid hormone biosynthesis Click to Show/Hide
2 Tryptophan metabolism
3 Metabolism of xenobiotics by cytochrome P450
4 Ovarian steroidogenesis
5 Chemical carcinogenesis
6 MicroRNAs in cancer
NetPath Pathway TSH Signaling Pathway Click to Show/Hide
2 IL4 Signaling Pathway
3 TGF_beta_Receptor Signaling Pathway
Reactome Endogenous sterols Click to Show/Hide
WikiPathways Metapathway biotransformation Click to Show/Hide
2 Estrogen metabolism
3 Benzo(a)pyrene metabolism
4 Tamoxifen metabolism
5 Tryptophan metabolism
6 Oxidation by Cytochrome P450
7 Nuclear Receptors Meta-Pathway
8 Estrogen Receptor Pathway
9 Sulindac Metabolic Pathway
10 Arylhydrocarbon receptor (AhR) signaling pathway
11 miR-targeted genes in muscle cell - TarBase
12 miR-targeted genes in lymphocytes - TarBase
13 miR-targeted genes in epithelium - TarBase
14 miR-targeted genes in adipocytes - TarBase
15 Phase 1 - Functionalization of compounds
References
Reference 1 ClinicalTrials.gov (NCT02059785) Phase 2 Study of Pinocembrin Injection to Treat Ischemic Stroke
Reference 2 Inhibitory effect of the combination therapy of simvastatin and pinocembrin on atherosclerosis in ApoE-deficient mice. Lipids Health Dis. 2012 Dec 5;11:166.
Reference 3 Selective inhibition of methoxyflavonoids on human CYP1B1 activity. Bioorg Med Chem. 2010 Sep 1;18(17):6310-5.
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Cite NPCDR
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Correspondence

X. N. Sun, Y. T. Zhang, Y. Zhou, X. C. Lian, L. L. Yan, T. Pan, T. Jin, H. Xie, Z. M. Liang, W. Q. Qiu, J. X. Wang, Z. R. Li, F. Zhu*, X. B. Sui*. NPCDR: natural product-based drug combination and its disease-specific molecular regulation. Nucleic Acids Research. 50(D1): 1324-1333 (2020). PMID: 34664659

Prof. Feng ZHU  (zhufeng@zju.edu.cn)

College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China


Prof. Xinbing SUI  (hzzju@hznu.edu.cn)

School of Pharmacy and Department of Medical Oncology, the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University, Hangzhou, China